$ python3 local_align.py -a data/calmodulin.fasta -b data/calpain.fasta -m blosum-62 -g -7 -o calcium_align.txt Alignment score: 93 Alignment: 5 LTEEQIAE-FKEAFSLFDKDGDGTITTKELGTVM-RSLGQN-P--TE--A 47 |.||.|.| ||..|...... |..|..|||.|.. |..... . |. . 538 LSEEEIDENFKALFRQLAGE-DMEISVKELRTILNRIISKHKDLRTKGFS 586 48 -E-LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95 | ...|.|..|.||||.....|| ...........| | ||.||. 587 LESCRSMVNLMDRDGNGKLGLVEF-NILWNRIRNYLS---I---FRKFDL 629 96 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143 |..|..||.|.|......|.|| .....|.|.......|..|....|| 630 DKSGSMSAYEMRMAIESAGFKL-NKKLYELIITRYSEPDLAVDFDNFV 676 Identity 47/148 Gaps 18/148